Resources
Tools and datasets developed by the lab, made available for the community.
An internal browser for the lab’s gene-expression data — organisms, gene catalogs, and RNA-seq experiments (currently covering Nicotiana tabacum and the Arabidopsis thaliana reference genome), with genotype and cell-type annotations and dataset visualizations.
Conserved AlTernative SpliciNg in Animals and Plants — an algorithmic pipeline for assessing the conservation of putative protein isoforms generated by alternative splicing. It employs a machine learning approach following a database search with the provided pair of protein sequences.
Seven biological replicates of Nicotiana tabacum L. cv. Bright Yellow (BY-2) cell culture samples cultured at auxin-supplemented conditions (ctrl) and three replicates cultured at auxin-starved (AF) conditions. Samples collected 48 hours after culture inoculation.